DualBrothers
Identify recombination events in phylogenetic history with DualBrothers
Requires Geneious 6.0+
Install the plugin by downloading the gplugin file and dragging it in to Geneious or use the plugin manager in Geneious (under Tools - Plugins in the menu).
Once installed, run the plugin by selecting a multiple sequence alignment and clicking on Detect Recomb. in the toolbar. The results are presented as a set of the most probable tree topologies along with graphs displayed inside the Alignment view tab.
1.1.5 (11 Nov 2016) – Download
– Fixed crash when input trees provided
– Fixed crash if two sequences have the same name
– Fixed crash if a sequence name has a trailing space
1.1.1 (20 Jan 2012) – Download for Geneious 5.4
Improved stability
1.1 (20 Oct 2008) – Download
Minin VN, Dorman KS, Suchard MA. Dual multiple change-point model leads to more accurate recombination detection, Bioinformatics, 21:3034-3042, 2005.