Transmembrane
Predict transmembrane spanning regions of proteins
Requires Geneious 2020.0+
Install the plugin by downloading the gplugin file and dragging it in to Geneious or use the plugin manager in Geneious (under Tools - Plugins in the menu).
Once installed, select a protein sequence and choose Annotate & Predict - Predict Transmembrane Regions from the menu to annotate predicted regions on the sequence. To view results as a graph, turn on Transmembrane Prediction in the Graphs section of the controls to the right of the Sequence view.
1.0.2 (02 May 2022) – Download for Geneious 2020.0
– Fixed a crash when sequence names were empty
1.0.1 (14 Nov 2019) – Download
– Replace Windows binaries with newly-built copies that can output posterior probabilities
1.0.0 (02 Aug 2019) – Download
– Upgraded modhmms to 1.1.1
0.9 (07 Apr 2011) – Download
Fixed compatibility with linux
0.7 (18 Sep 2008) – Download
– More informative annotations