Molecular Biology and NGS Analysis Software for Academic & Government Research

Geneious Prime takes you from data to discovery faster with an easy-to-use interface, industry-leading tools, and intuitive data management. With Geneious, any researcher working with sequencing data has immediate access to a wide-range of essential features and world-class support. Geneious Prime is the world’s leading molecular biology and NGS analysis software, with the most citations globally, and is used by more than 4,000 universities worldwide.


NGS Analysis and Genomics

  • De novo assembly or reference mapping of Illumina, PacBio, or Ion Torrent reads (any length, paired ends, barcodes), using industry leading algorithms, including TopHat and Velvet.
  • Comprehensive analysis of data including genome browser, contig visualization, SNP calling, and RNA-Seq expression analysis.

Sequence and Chromatogram Analysis

  • Trim, assemble, and view Sanger sequencing trace files, correct base calls, and create consensus sequences. Automatic annotation for gene prediction, motifs, translation, and variant calling.
  • Genotype microsatellite traces, with automated ladder fitting and peak calling, and generate tables of alleles.

Alignment and Tree Building

  • Perform pairwise and multiple alignments of DNA or protein using trusted algorithms, including MAFFT and ClustalW. View and edit alignments with real-time translation and highlighting.
  • Build phylogenetic trees using peer-reviewed algorithms, including RAxML and PAUP*, and adjust display settings for publication-ready graphics.

Molecular Cloning

  • View plasmid maps, automatically annotate vectors, and copy-paste sequences with annotations. Find restriction sites; digest, ligate, and perform Golden Gate, Gibson, and Gateway cloning.
  • Design primers, find CRISPR sites, and optimize codons. Track history and parent descendant lineage throughout cloning processes.

Searching, Sharing and Automation

  • Batch BLAST against NCBI and directly search GenBank. Centralize and collaborate on data with seamlessly integrated shared repositories. Import and export most industry standard le formats.
  • Set up automated work flows to increase efficiency, control business processes, and reduce human error in your research.

What’s New in Geneious Prime 2019

  • New features include custom codon usage tables, rapid manual primer design, powerful primer annotation display, easy extraction of PCR and restriction digest products, and drag and drop export.
  • Discover all the brand-new features, improvements, and enhancements in Geneious Prime 2019.