Geneious Prime
Geneious Biologics
Metagenomics Analysis
Learn how to assemble, filter and analyze an NGS amplicon metagenomic data set.
Preprocessing of NGS Amplicon Data
INSIDE THE VIDEO
Learn how to preprocess NGS amplicon data, and trim and merge paired reads.
- Trim and filter
- Merge reads
- Extract reads
LENGTH
5 minutes
Clustering and Batch Blasting Amplicon Data
INSIDE THE VIDEO
Learn how to cluster and batch blast amplicon data in Geneious Prime.
- Cluster records
- Set up custom BLAST
- Batch BLAST
LENGTH
5 minutes
Creating a Taxonomy Database
INSIDE THE VIDEO
Learn how to create a taxonomy database in Geneious Prime.
- Remove duplicates
- Download hits
- Extract the hits region
- Create the database
- Rename entries
LENGTH
4 minutes
Classifying Amplicon Data with the Sequence
INSIDE THE VIDEO
Learn how to classify amplicon data with the Sequence Classifier in Geneious Prime.
- Classify sequences
- Reading the results
LENGTH
4 minutes
Recommended Resources
METAGENOMICS ANALYSIS
TUTORIAL
Practice Amplicon Metagenomics
An exercise in assembling, filtering and analyzing a NGS metagenomic data set.
MANUAL
Instructions for Sequence Classifier
A guide to using the Sequence Classifier plugin in Geneious Prime.
FEATURES
NGS Visualization and Analysis
Annotated genomes and assemblies, powerful variant calling and expression analysis.
GENEIOUS ACADEMY
