Geneious Prime
Geneious Biologics
Microsatellite Analysis
Use the Microsatellites Plugin to import ABI fragment analysis files, visualize traces, fit ladders, call peaks and more.
Fitting Ladders for Microsatellite Analysis
INSIDE THE VIDEO
Ensure your ladder is accurately called. Check the trim on your traces is set appropriately and that the correct peaks are called in the ladder.
LENGTH
4 minutes
Setting the Loci for Microsatellite Analysis
INSIDE THE VIDEO
Define the number of peaks, repeat units, and ranges for each locus. Add or remove additional loci and correct any incorrect or missing peaks.
LENGTH
2 minutes
Binning for Microsatellites
INSIDE THE VIDEO
Predict bins, resolve any unbinned peaks, view graphs, and export the resulting allele table as a CSV file.
LENGTH
2 minutes
Recommended Resources
MICROSATELLITE ANALYSIS
TUTORIAL
Practice Analyzing Microsatellites
Use the Microsatellite plugin for Geneious Prime with this practical exercise.
MANUAL
Instructions for Microsatellite Analysis
Guide to using the microsatellite analysis tools in Geneious Prime.
FAQ
Getting Started with Microsatellites
Learn to use the Microsatellite Plugin to analyze traces from ABI fragment analysis machines.
GENEIOUS ACADEMY
