Knowledge Center

Learn more about the applications and features of Geneious Prime

GUIDE

Rolling Out Geneious Prime

Introducing new software across a department or institution can appear daunting, but taking the time to consider the journey, obstacles and milestones will make for a successful rollout.
MANUAL

Geneious Prime Manual

Full instructions for installing and getting started with Geneious are available in the manual. Also included are descriptions and help for all of the features and
functionalities available.
DATA SHEET

Geneious Prime – Biological Sequence Data Made Easy

Geneious is developed by a team that cares a great deal about finding new ways to get science done faster and more efficiently. With Geneious, you’ll find your entire workflow and the world’s most powerful analysis algorithms available behind the
APPLICATION NOTES

De Novo Assembly and Reconstruction of Complete Circular Chloroplast Genomes

Chloroplast genomes contain large (≈25,000 bp) almost perfect inverted repeats (IR). During de novo assembly individual repeats cannot be resolved unless the paired-read insert size is larger than the
APPLICATION NOTES

De Novo Assembly of a Bacterial Genome from Illumina MiSeq Data

The Geneious de novo assembler is an overlap assembler optimized for genomes of 100 Mbp or less, and is thus ideal for applications of viral and bacterial genomes
APPLICATION NOTES

Creating SNPtrees

In epidemiological studies, isolates usually have very little diversity and require full genomic analysis to differentiate and classify. Reducing a whole genome alignment to just the subset of statistically validated variant sequence positions provides a condensed dataset for phylogenetic analysis and classification of isolates
APPLICATION NOTES

Circular De Novo Assembly of Organelle Genomes

Circular genomes, such as viruses, bacteria, mitochondria and plasmids, are common. However, assembly of such genomes can be difficult in the absence of a reference genome, as most de novo assemblers do not account for circularity
APPLICATION NOTES

Analysis of Metagenomic NGS Data: Identification of Zika Virus

A whole pipeline for the analysis of metagenomic Next Generation Sequencing (NGS) data can be carried out with Geneious. Analysis of complex microbiomes or detection of low-concentration
APPLICATION NOTES

Homology-Based Cloning Methods

Geneious provides a tool for simulating a number of homology-based cloning methods. These methods are described in this application note, where we show how it is possible to design experiments using exonuclease-based recombination
POSTER

Geneious R10 Poster

Geneious R10 incorporates industry-leading algorithms and applications for genomic & protein sequence analyses via a single robust desktop program. New and improved features include industry leading cloning and plasmid viewing, alignment masking, chimera filtering, and better structural variant mapping and long read assembly.