Install the plugin by downloading the gplugin file and dragging it in to Geneious or use the plugin manager in Geneious (under Tools - Plugins in the menu).
Once installed, run the plugin by selecting a nucleotide sequence and choosing Annotate & Predict - Predict Genes with Glimmer from the menu. Results are saved as annotations on your sequence. Optionally a model can be pre-calculated from a sequence with annotated known genes using Annotate & Predict - Build Glimmer Gene Model from the menu.
1.5 (10 Mar 2017) – Download
– Fixed the plugin so it will work on Windows
– Made it fail gracefully on training annotations that Glimmer is unable to process
– Fixed cryptic failure messages on some sequences
– Fixed a crash when the Glimmer model output contains an empty line
1.4 (07 Nov 2012) – Download
-Improved memory efficiency
-Fixed parse error
1.3 (08 Jul 2011) – Download
Improved error handling to track down issues with Glimmer on certain data