Mapping and SNP calling

In this tutorial you will learn how to perform a reference assembly with next-generation sequencing (NGS) data, and to call SNPs on the assembled contig. You will learn the typical steps of an NGS workflow such as quality trimming, read pairing, and generating a consensus sequence.

DOWNLOAD MAPPING & SNP CALLING TUTORIAL

Tutorial Instructions

Geneious Prime tutorials are installed by either 'Dragging and dropping' the zip file into Geneious Prime or using File → Import → From File... in the Geneious Prime menu. Do not unzip the tutorial.

The web based version of the tutorial without the sequence files can be accessed here.