EMBOSS Protein

Predict secondary structure, antigenic regions and signal cleavage sites.

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Requires Geneious 8.0+

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This plugin includes three protein analysis tools from the EMBOSS package: antigenic to predict antigenic regions, sigcleave to predict signal cleavage sites, and garnier to predict secondary structures. 

Install the plugin by downloading the gplugin file and dragging it in to Geneious or use the plugin manager in Geneious (under Tools - Plugins in the menu).

Once installed, run the plugin by selecting a protein sequence and using one of the protein analysis options in the Annotate & Predict menu.

EMBOSS: The European Molecular Biology Open Software Suite (2000) 
Rice,P. Longden,I. and Bleasby,A. 
Trends in Genetics 16, (6) pp276--277