Streamlined microsatellite genotyping

Microsatellites Plugin

Streamlined microsatellite genotyping. Call peaks, bin them and produce a table of genotypes to export for further analysis.

Quick Start

Install the plugin by downloading the gplugin file and dragging it in to Geneious Prime or use the plugin manager in Geneious Prime (under Tools - Plugins in the menu).

Once installed, you can import microsatellite trace files in fsa format. Refer to the manual for further information.


1.4.7 (15 Feb 2021) – Download

– Fixed a crash due to rounding error that could happen when a bin midpoint is exactly at a ladder peak

– Fixed a crash when loading FSA files with more than 5 traces

– Fixed quirky scrolling behavior with Apple magic mouse or trackpad

1.4.6 (26 Nov 2018) – Download

– Fixed a bug where moving the mouse while viewing multiple traces would cause all but the top trace to be partially obscured

1.4.5 (29 Oct 2018) – Download

– Updated to support Geneious Prime 2019

– Fixed crashes when a date field in a fsa file is empty

1.4.4 (25 Jan 2017) – Download

– Updated to support Geneious R10.1

1.4.0 (31 Mar 2014) – Download

– Fix some crashes in bin guessing

– Fix resource leak (threads not terminated)

– Fix occasional crash in notification slider animation

1.2.0 (27 May 2013) – Download for Geneious 5.6

– Added more ladders

– Ladders are now stored in an editable text file


Get started with Geneious today