RAxML
Fast maximum-likelihood tree building on large datasets with RAxML
Requires Geneious 10.0+
Install the plugin by downloading the gplugin file and dragging it in to Geneious Prime or use the plugin manager in Geneious Prime (under Tools - Plugins in the menu).
Once installed, run the plugin by selecting a multiple sequence alignment and clicking on Tree in the toolbar. RAxML is available as an option at the top of the Tree building options window.
4.0 (29 Oct 2018) – Download
– Added link to RAxML website
– Added citation information for RAxML
3.0 (29 Sep 2017) – Download for Geneious 10.0
– Recompiled binaries to work on all supported platforms
2.0 (27 Sep 2016) – Download for Geneious 10.0
– Update RAxML to version 8.2.7
1.0 (02 Sep 2013) – Download for Geneious 7.0
– First release
Alexandros Stamatakis : RAxML-VI-HPC: Maximum Likelihood-based Phylogenetic Analyses with Thousands of Taxa and Mixed Models, Bioinformatics 22(21):26882690, 2006 [4].