Create Automated Workflows in Geneious Prime

Course Content

Introduction to Automated Workflows

Create a multi-step workflow starting from raw Sanger sequences and ending with a phylogenetic tree.
LENGTH 4 minutes

Creating Advanced Workflows

Learn to run the same workflow in parallel on multiple document or sequence sets using branching.
LENGTH 4 minutes

Recommended Resources

How do I script or automate Geneious Prime?

The Command Line Interface (CLI) allows the creation of custom pipelines.

Running workflows from the CLI

Workflows configured in the GUI interface can be exported and run in the command line.

Manual for Workflows

A guide to creating and using automated workflows in Geneious.

More Geneious Academy

TUTORIALHow to Build Automated Workflows in Geneious Prime
Build a workflow that runs from raw shark barcoding chromatograms to a finished phylogenetic tree in one pass.
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VIDEO SERIESPhylogenetic Trees in Geneious Prime
Build and manipulate a phylogenetic tree using the Geneious tree viewer.
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VIDEO SERIESSanger Sequence Analysis in Geneious Prime
Align your chromatograms to a reference sequence, find variants and verify sequences.
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VIDEO SERIESWorking with GenBank in Geneious Prime
Access GenBank, prepare and submit sequences and alignments to the GenBank database from the Geneious interface.
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