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Geneious Prime
Geneious Biologics
Creating Automated Workflows
Use workflows to automate your analyses and run a set of operations with a single click.
Course Content
Introduction to Automated Workflows
INSIDE THE VIDEO
Create a multi-step workflow starting from raw Sanger sequences and ending with a phylogenetic tree.
LENGTH
4 minutes
Creating Advanced Workflows
INSIDE THE VIDEO
Learn to run the same workflow in parallel on multiple document or sequence sets using branching.
LENGTH
4 minutes
Recommended Resources
How do I script or automate Geneious Prime?
The Command Line Interface (CLI) allows the creation of custom pipelines.
Running workflows from the CLI
Workflows configured in the GUI interface can be exported and run in the command line.
Manual for Workflows
A guide to creating and using automated workflows in Geneious.
More Geneious Academy
TUTORIALPractice Building Automated Workflows
Practice setting up an automatic workflow to run a pipeline from Sanger sequences to a phylogenetic tree.
VIDEO SERIESPhylogenetic Trees
In this video learn the basic steps to building a phylogenetic tree and manipulate it using the Geneious tree viewer.
VIDEO SERIESSanger Sequence Analysis
Learn to align your chromatograms to a reference sequence, find variants and verify sequences in this video series.
VIDEO SERIESWorking with GenBank
Watch the series on how to access GenBank, and prepare and submit sequences and alignments to the GenBank database.
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