Features

Access all of the bioinformatic tools you need from one program.

NGS Analysis and Genomics

De novo assembly or reference mapping of Illumina, PacBio or Ion Torrent reads (any length, paired ends, barcodes), using industry leading algorithms including TopHat and Velvet.

Comprehensive analysis of data including genome browser, contig visualization, SNP calling and RNA-Seq expression analysis.

Assembly & MappingVisualization & Analysis

Sequence and Chromatogram Analysis

Trim, assemble and view Sanger sequencing trace files, correct base calls and create consensus sequences. Automatic annotation for gene prediction, motifs, translation and variant calling.

Genotype microsatellite traces with automated ladder fitting and peak calling and generate tables of alleles.

Analysis & AnnotationMicrosatellites

Alignment and Tree Building

Perform pairwise and multiple alignments of DNA or protein using trusted algorithms including MAFFT and ClustalW. View and edit alignments with real-time translation and highlighting.

Build phylogenetic trees using peer-reviewed algorithms including RAxML and PAUP* and adjust display settings for publication-ready graphics.

AlignmentTree Building

Molecular Cloning

View plasmid maps, automatically annotate vectors and copy-paste sequences with annotations. Find restriction sites, digest, ligate and perform Golden Gate, Gibson and Gateway cloning.

Design primers, find CRISPR sites and optimize codons. Track history and parent descendant lineage throughout cloning processes.

CloningPrimer Design

Searching, Sharing and Automation

Batch BLAST against NCBI and directly search GenBank. Centralize and collaborate on data with seamlessly integrated shared repositories. Import and export most industry standard file formats.

Setup automated workflows to increase efficiency, control business processes and reduce human error in your research.

SearchingSharingWorkflows
RNA-Seq - Volcano Plot

What’s New in Geneious R11

New features include improved volcano and PCA plots for expression analysis, new CRISPR Cpf1 option and silent mutation analysis for restriction sites.

Discover all of the brand new features, improvements and enhancements in Geneious R11.

What's New
I have found Geneious to be one of the most intuitive and powerful sequence analysis programs that I have used in all my years working in the molecular biology field. Thanks for making my life so much easier.
Prof. John PayneUniversity of California